diff options
Diffstat (limited to 'gsl-1.9/fit/linear.c')
-rw-r--r-- | gsl-1.9/fit/linear.c | 346 |
1 files changed, 346 insertions, 0 deletions
diff --git a/gsl-1.9/fit/linear.c b/gsl-1.9/fit/linear.c new file mode 100644 index 0000000..ef5ae5e --- /dev/null +++ b/gsl-1.9/fit/linear.c @@ -0,0 +1,346 @@ +/* fit/linear.c + * + * Copyright (C) 2000 Brian Gough + * + * This program is free software; you can redistribute it and/or modify + * it under the terms of the GNU General Public License as published by + * the Free Software Foundation; either version 2 of the License, or (at + * your option) any later version. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program; if not, write to the Free Software + * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA. + */ + +#include <config.h> +#include <gsl/gsl_errno.h> +#include <gsl/gsl_fit.h> + +/* Fit the data (x_i, y_i) to the linear relationship + + Y = c0 + c1 x + + returning, + + c0, c1 -- coefficients + cov00, cov01, cov11 -- variance-covariance matrix of c0 and c1, + sumsq -- sum of squares of residuals + + This fit can be used in the case where the errors for the data are + uknown, but assumed equal for all points. The resulting + variance-covariance matrix estimates the error in the coefficients + from the observed variance of the points around the best fit line. +*/ + +int +gsl_fit_linear (const double *x, const size_t xstride, + const double *y, const size_t ystride, + const size_t n, + double *c0, double *c1, + double *cov_00, double *cov_01, double *cov_11, double *sumsq) +{ + double m_x = 0, m_y = 0, m_dx2 = 0, m_dxdy = 0; + + size_t i; + + for (i = 0; i < n; i++) + { + m_x += (x[i * xstride] - m_x) / (i + 1.0); + m_y += (y[i * ystride] - m_y) / (i + 1.0); + } + + for (i = 0; i < n; i++) + { + const double dx = x[i * xstride] - m_x; + const double dy = y[i * ystride] - m_y; + + m_dx2 += (dx * dx - m_dx2) / (i + 1.0); + m_dxdy += (dx * dy - m_dxdy) / (i + 1.0); + } + + /* In terms of y = a + b x */ + + { + double s2 = 0, d2 = 0; + double b = m_dxdy / m_dx2; + double a = m_y - m_x * b; + + *c0 = a; + *c1 = b; + + /* Compute chi^2 = \sum (y_i - (a + b * x_i))^2 */ + + for (i = 0; i < n; i++) + { + const double dx = x[i * xstride] - m_x; + const double dy = y[i * ystride] - m_y; + const double d = dy - b * dx; + d2 += d * d; + } + + s2 = d2 / (n - 2.0); /* chisq per degree of freedom */ + + *cov_00 = s2 * (1.0 / n) * (1 + m_x * m_x / m_dx2); + *cov_11 = s2 * 1.0 / (n * m_dx2); + + *cov_01 = s2 * (-m_x) / (n * m_dx2); + + *sumsq = d2; + } + + return GSL_SUCCESS; +} + + +/* Fit the weighted data (x_i, w_i, y_i) to the linear relationship + + Y = c0 + c1 x + + returning, + + c0, c1 -- coefficients + s0, s1 -- the standard deviations of c0 and c1, + r -- the correlation coefficient between c0 and c1, + chisq -- weighted sum of squares of residuals */ + +int +gsl_fit_wlinear (const double *x, const size_t xstride, + const double *w, const size_t wstride, + const double *y, const size_t ystride, + const size_t n, + double *c0, double *c1, + double *cov_00, double *cov_01, double *cov_11, + double *chisq) +{ + + /* compute the weighted means and weighted deviations from the means */ + + /* wm denotes a "weighted mean", wm(f) = (sum_i w_i f_i) / (sum_i w_i) */ + + double W = 0, wm_x = 0, wm_y = 0, wm_dx2 = 0, wm_dxdy = 0; + + size_t i; + + for (i = 0; i < n; i++) + { + const double wi = w[i * wstride]; + + if (wi > 0) + { + W += wi; + wm_x += (x[i * xstride] - wm_x) * (wi / W); + wm_y += (y[i * ystride] - wm_y) * (wi / W); + } + } + + W = 0; /* reset the total weight */ + + for (i = 0; i < n; i++) + { + const double wi = w[i * wstride]; + + if (wi > 0) + { + const double dx = x[i * xstride] - wm_x; + const double dy = y[i * ystride] - wm_y; + + W += wi; + wm_dx2 += (dx * dx - wm_dx2) * (wi / W); + wm_dxdy += (dx * dy - wm_dxdy) * (wi / W); + } + } + + /* In terms of y = a + b x */ + + { + double d2 = 0; + double b = wm_dxdy / wm_dx2; + double a = wm_y - wm_x * b; + + *c0 = a; + *c1 = b; + + *cov_00 = (1 / W) * (1 + wm_x * wm_x / wm_dx2); + *cov_11 = 1 / (W * wm_dx2); + + *cov_01 = -wm_x / (W * wm_dx2); + + /* Compute chi^2 = \sum w_i (y_i - (a + b * x_i))^2 */ + + for (i = 0; i < n; i++) + { + const double wi = w[i * wstride]; + + if (wi > 0) + { + const double dx = x[i * xstride] - wm_x; + const double dy = y[i * ystride] - wm_y; + const double d = dy - b * dx; + d2 += wi * d * d; + } + } + + *chisq = d2; + } + + return GSL_SUCCESS; +} + + + +int +gsl_fit_linear_est (const double x, + const double c0, const double c1, + const double c00, const double c01, const double c11, + double *y, double *y_err) +{ + *y = c0 + c1 * x; + *y_err = sqrt (c00 + x * (2 * c01 + c11 * x)); + return GSL_SUCCESS; +} + + +int +gsl_fit_mul (const double *x, const size_t xstride, + const double *y, const size_t ystride, + const size_t n, + double *c1, double *cov_11, double *sumsq) +{ + double m_x = 0, m_y = 0, m_dx2 = 0, m_dxdy = 0; + + size_t i; + + for (i = 0; i < n; i++) + { + m_x += (x[i * xstride] - m_x) / (i + 1.0); + m_y += (y[i * ystride] - m_y) / (i + 1.0); + } + + for (i = 0; i < n; i++) + { + const double dx = x[i * xstride] - m_x; + const double dy = y[i * ystride] - m_y; + + m_dx2 += (dx * dx - m_dx2) / (i + 1.0); + m_dxdy += (dx * dy - m_dxdy) / (i + 1.0); + } + + /* In terms of y = b x */ + + { + double s2 = 0, d2 = 0; + double b = (m_x * m_y + m_dxdy) / (m_x * m_x + m_dx2); + + *c1 = b; + + /* Compute chi^2 = \sum (y_i - b * x_i)^2 */ + + for (i = 0; i < n; i++) + { + const double dx = x[i * xstride] - m_x; + const double dy = y[i * ystride] - m_y; + const double d = (m_y - b * m_x) + dy - b * dx; + d2 += d * d; + } + + s2 = d2 / (n - 1.0); /* chisq per degree of freedom */ + + *cov_11 = s2 * 1.0 / (n * (m_x * m_x + m_dx2)); + + *sumsq = d2; + } + + return GSL_SUCCESS; +} + + +int +gsl_fit_wmul (const double *x, const size_t xstride, + const double *w, const size_t wstride, + const double *y, const size_t ystride, + const size_t n, + double *c1, double *cov_11, double *chisq) +{ + + /* compute the weighted means and weighted deviations from the means */ + + /* wm denotes a "weighted mean", wm(f) = (sum_i w_i f_i) / (sum_i w_i) */ + + double W = 0, wm_x = 0, wm_y = 0, wm_dx2 = 0, wm_dxdy = 0; + + size_t i; + + for (i = 0; i < n; i++) + { + const double wi = w[i * wstride]; + + if (wi > 0) + { + W += wi; + wm_x += (x[i * xstride] - wm_x) * (wi / W); + wm_y += (y[i * ystride] - wm_y) * (wi / W); + } + } + + W = 0; /* reset the total weight */ + + for (i = 0; i < n; i++) + { + const double wi = w[i * wstride]; + + if (wi > 0) + { + const double dx = x[i * xstride] - wm_x; + const double dy = y[i * ystride] - wm_y; + + W += wi; + wm_dx2 += (dx * dx - wm_dx2) * (wi / W); + wm_dxdy += (dx * dy - wm_dxdy) * (wi / W); + } + } + + /* In terms of y = b x */ + + { + double d2 = 0; + double b = (wm_x * wm_y + wm_dxdy) / (wm_x * wm_x + wm_dx2); + + *c1 = b; + + *cov_11 = 1 / (W * (wm_x * wm_x + wm_dx2)); + + /* Compute chi^2 = \sum w_i (y_i - b * x_i)^2 */ + + for (i = 0; i < n; i++) + { + const double wi = w[i * wstride]; + + if (wi > 0) + { + const double dx = x[i * xstride] - wm_x; + const double dy = y[i * ystride] - wm_y; + const double d = (wm_y - b * wm_x) + (dy - b * dx); + d2 += wi * d * d; + } + } + + *chisq = d2; + } + + return GSL_SUCCESS; +} + +int +gsl_fit_mul_est (const double x, + const double c1, const double c11, + double *y, double *y_err) +{ + *y = c1 * x; + *y_err = sqrt (c11) * fabs (x); + return GSL_SUCCESS; +} |